HL_2J28_032
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2J28_032 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.1147
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
2J28|1|B|C|1092
2J28|1|B|G|1093
2J28|1|B|U|1094
2J28|1|B|A|1095
2J28|1|B|A|1096
2J28|1|B|U|1097
2J28|1|B|A|1098
2J28|1|B|G|1099
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 4
- 50S RIBOSOMAL PROTEIN L36
- Chain G
- 50S RIBOSOMAL PROTEIN L6
- Chain I
- 50S RIBOSOMAL PROTEIN L11
Coloring options: