HL_3J8G_014

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

3J8G|1|B|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_014 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2734

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

3J8G|1|B|A|382
3J8G|1|B|C|383
3J8G|1|B|A|384
3J8G|1|B|C|385
3J8G|1|B|G|386
3J8G|1|B|U|387
3J8G|1|B|G|388
3J8G|1|B|G|389
3J8G|1|B|U|390
3J8G|1|B|A|391
3J8G|1|B|U|392

Current chains

Chain B

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L28