HL_3J8G_063

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

3J8G|1|B|G|2529

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_063 not in the Motif Atlas

Homologous match to HL_7A0S_060

Geometric discrepancy: 0.3148

The information below is about HL_7A0S_060

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

3J8G|1|B|U|2528
3J8G|1|B|G|2529
3J8G|1|B|A|2530
3J8G|1|B|A|2531
3J8G|1|B|G|2532
3J8G|1|B|U|2533
3J8G|1|B|A|2534
3J8G|1|B|G|2535

Current chains

Chain B

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain G

50S ribosomal protein L6