HL_3JBV_017
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 3JBV|1|A|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBV_017 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1298
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
3JBV|1|A|G|786
3JBV|1|A|A|787
3JBV|1|A|U|788
3JBV|1|A|U|789
3JBV|1|A|A|790
3JBV|1|A|G|791
3JBV|1|A|A|792
3JBV|1|A|U|793
3JBV|1|A|A|794
3JBV|1|A|C|795
3JBV|1|A|C|796
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain K
- 30S ribosomal protein S11
- Chain W
- Transfer RNA; tRNA
- Chain X
- RNA (5'-R(P*CP*UP*GP*GP*CP*CP*CP*UP*CP*AP*A)-3')
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
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