HL_4CSU_014

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

4CSU|1|B|U|387

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_014 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.5165

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4CSU|1|B|A|382
4CSU|1|B|C|383
4CSU|1|B|A|384
4CSU|1|B|C|385
4CSU|1|B|G|386
4CSU|1|B|U|387
4CSU|1|B|G|388
4CSU|1|B|G|389
4CSU|1|B|U|390
4CSU|1|B|A|391
4CSU|1|B|U|392

Current chains

Chain B

23S RRNA

Nearby chains

Chain 0

50S RIBOSOMAL PROTEIN L28