HL_4TUB_060
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 4TUB|1|RA|U|794, 4TUB|1|RA|A|798, 4TUB|1|RA|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4TUB_060 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.0902
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
4TUB|1|RA|G|791
4TUB|1|RA|G|792
4TUB|1|RA|A|793
4TUB|1|RA|U|794
4TUB|1|RA|G|795
4TUB|1|RA|C|796
4TUB|1|RA|A|797
4TUB|1|RA|A|798
4TUB|1|RA|A|799
4TUB|1|RA|C|800
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R5
- 50S ribosomal protein L32
- Chain R7
- 50S ribosomal protein L34
- Chain RE
- 50S ribosomal protein L3
- Chain RW
- 50S ribosomal protein L22
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