HL_4UY8_012

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

4UY8|1|A|G|386, 4UY8|1|A|G|389

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0834

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4UY8|1|A|A|382
4UY8|1|A|C|383
4UY8|1|A|A|384
4UY8|1|A|C|385
4UY8|1|A|G|386
4UY8|1|A|U|387
4UY8|1|A|G|388
4UY8|1|A|G|389
4UY8|1|A|U|390
4UY8|1|A|A|391
4UY8|1|A|U|392

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain X

50S RIBOSOMAL PROTEIN L28