HL_4V49_046

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_046 not in the Motif Atlas

Homologous match to HL_7A0S_008

Geometric discrepancy: 0.4508

The information below is about HL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

13

Unit IDs

4V49|1|B0|C|223
4V49|1|B0|G|224
4V49|1|B0|G|225
4V49|1|B0|C|226
4V49|1|B0|G|227
4V49|1|B0|A|228
4V49|1|B0|G|229

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BJ

50S ribosomal protein L15

Chain BY

50S ribosomal protein L31