HL_4V4I_097
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GAA(M2G)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 4V4I|1|y|A|968, 4V4I|1|y|G|971
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4I_097 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.2333
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V4I|1|y|G|963
4V4I|1|y|A|964
4V4I|1|y|A|965
4V4I|1|y|M2G|966
4V4I|1|y|5MC|967
4V4I|1|y|A|968
4V4I|1|y|A|969
4V4I|1|y|C|970
4V4I|1|y|G|971
4V4I|1|y|C|972
Current chains
- Chain y
- 16S SMALL SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S13
- Chain z
- Transfer RNA; tRNA
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