HL_4V4S_114
3D structure
- PDB id
- 4V4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.76 Å
Loop
- Sequence
- CCGGGAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4S_114 not in the Motif Atlas
- Geometric match to HL_4V9F_032
- Geometric discrepancy: 0.3227
- The information below is about HL_4V9F_032
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Anticodon loop related
- Motif group
- HL_77082.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V4S|1|BA|C|486
4V4S|1|BA|C|487
4V4S|1|BA|G|488
4V4S|1|BA|G|489
4V4S|1|BA|G|491
4V4S|1|BA|A|492
4V4S|1|BA|G|493
4V4S|1|BA|G|494
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BW
- 50S ribosomal protein L22
Coloring options: