HL_4V5H_049

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

4V5H|1|BB|G|386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_049 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1905

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V5H|1|BB|A|382
4V5H|1|BB|C|383
4V5H|1|BB|A|384
4V5H|1|BB|C|385
4V5H|1|BB|G|386
4V5H|1|BB|U|387
4V5H|1|BB|G|388
4V5H|1|BB|G|389
4V5H|1|BB|U|390
4V5H|1|BB|A|391
4V5H|1|BB|U|392

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B0

50S RIBOSOMAL PROTEIN L28