HL_4V5H_065

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4V5H|1|BB|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_065 not in the Motif Atlas

Geometric match to HL_7A0S_048

Geometric discrepancy: 0.3919

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

8

Unit IDs

4V5H|1|BB|C|1064
4V5H|1|BB|U|1065
4V5H|1|BB|U|1066
4V5H|1|BB|A|1067
4V5H|1|BB|G|1068
4V5H|1|BB|A|1069
4V5H|1|BB|A|1070
4V5H|1|BB|G|1071
4V5H|1|BB|C|1072
4V5H|1|BB|A|1073
4V5H|1|BB|G|1074

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BI

50S RIBOSOMAL PROTEIN L11