HL_4V5H_107
3D structure
- PDB id
- 4V5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GUCAUGGGGUGUC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5H_107 not in the Motif Atlas
- Homologous match to HL_7OSM_128
- Geometric discrepancy: 0.345
- The information below is about HL_7OSM_128
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25222.2
- Basepair signature
- cWW-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V5H|1|AV|G|29
4V5H|1|AV|U|30
4V5H|1|AV|C|31
4V5H|1|AV|A|32
4V5H|1|AV|U|33
4V5H|1|AV|G|34
4V5H|1|AV|G|35
4V5H|1|AV|G|36
4V5H|1|AV|G|37
4V5H|1|AV|U|38
4V5H|1|AV|G|39
4V5H|1|AV|U|40
4V5H|1|AV|C|41
Current chains
- Chain AV
- P-SITE TRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S RIBOSOMAL PROTEIN S9
- Chain AM
- 30S RIBOSOMAL PROTEIN S13
- Chain AX
- MRNA
Coloring options: