HL_4V66_065

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V66_065 not in the Motif Atlas

Homologous match to HL_5J7L_167

Geometric discrepancy: 0.4039

The information below is about HL_5J7L_167

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V66|1|BB|C|1363
4V66|1|BB|G|1364
4V66|1|BB|A|1365
4V66|1|BB|A|1366
4V66|1|BB|A|1367
4V66|1|BB|G|1368

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BS

50S ribosomal protein L31

Chain BV

50S ribosomal protein L34