HL_4V6K_024
3D structure
- PDB id
- 4V6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.25 Å
Loop
- Sequence
- U(1MG)(PSU)(5MU)GAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 4V6K|1|AB|A|751, 4V6K|1|AB|A|752
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6K_024 not in the Motif Atlas
- Homologous match to HL_5J7L_155
- Geometric discrepancy: 0.1649
- The information below is about HL_5J7L_155
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V6K|1|AB|U|744
4V6K|1|AB|1MG|745
4V6K|1|AB|PSU|746
4V6K|1|AB|5MU|747
4V6K|1|AB|G|748
4V6K|1|AB|A|749
4V6K|1|AB|A|750
4V6K|1|AB|A|751
4V6K|1|AB|A|752
4V6K|1|AB|A|753
Current chains
- Chain AB
- ribosomal RNA 23S
Nearby chains
- Chain AE
- 50S ribosomal protein L3
- Chain AT
- 50S ribosomal protein L22
- Chain Ac
- 50S ribosomal protein L32
- Chain Ae
- 50S ribosomal protein L34
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