HL_4V6K_045

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

4V6K|1|AB|U|1729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6K_045 not in the Motif Atlas

Geometric match to HL_6JOO_002

Geometric discrepancy: 0.2121

The information below is about HL_6JOO_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V6K|1|AB|C|1728
4V6K|1|AB|U|1729
4V6K|1|AB|C|1730
4V6K|1|AB|G|1731

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains