HL_4V6K_047
3D structure
- PDB id
- 4V6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.25 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 4V6K|1|AB|U|1782, 4V6K|1|AB|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6K_047 not in the Motif Atlas
- Homologous match to HL_7RQB_045
- Geometric discrepancy: 0.2245
- The information below is about HL_7RQB_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.5
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
4V6K|1|AB|U|1777
4V6K|1|AB|U|1778
4V6K|1|AB|U|1779
4V6K|1|AB|A|1780
4V6K|1|AB|U|1781
4V6K|1|AB|U|1782
4V6K|1|AB|A|1783
4V6K|1|AB|A|1784
4V6K|1|AB|A|1785
4V6K|1|AB|A|1786
4V6K|1|AB|A|1787
Current chains
- Chain AB
- ribosomal RNA 23S
Nearby chains
- Chain AD
- 50S ribosomal protein L2
- Chain Ae
- 50S ribosomal protein L34
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