HL_4V6L_045
3D structure
- PDB id
- 4V6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.2 Å
Loop
- Sequence
- UGAAUCCAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6L_045 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.3958
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V6L|1|BB|U|158
4V6L|1|BB|G|159
4V6L|1|BB|A|160
4V6L|1|BB|A|161
4V6L|1|BB|U|162
4V6L|1|BB|C|163
4V6L|1|BB|C|164
4V6L|1|BB|A|165
4V6L|1|BB|U|166
4V6L|1|BB|A|167
4V6L|1|BB|G|168
Current chains
- Chain BB
- 50S ribosomal RNA 23S
Nearby chains
- Chain BI
- 50S ribosomal protein L9
- Chain BY
- 50S ribosomal protein L28
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