HL_4V6O_057
3D structure
- PDB id
- 4V6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14.7 Å
Loop
- Sequence
- UUUUGUAUAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6O_057 not in the Motif Atlas
- Homologous match to HL_7RQB_018
- Geometric discrepancy: 0.3711
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
4V6O|1|BB|U|566
4V6O|1|BB|U|567
4V6O|1|BB|U|568
4V6O|1|BB|U|569
4V6O|1|BB|G|570
4V6O|1|BB|U|571
4V6O|1|BB|A|572
4V6O|1|BB|U|573
4V6O|1|BB|A|574
4V6O|1|BB|A|575
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain B3
- 50S ribosomal protein L32
- Chain BE
- 50S ribosomal protein L3
- Chain BN
- 50S ribosomal protein L15
- Chain BS
- 50S ribosomal protein L20
- Chain BT
- 50S ribosomal protein L21
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