HL_4V6Z_050

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

4V6Z|1|BA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Z_050 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2947

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V6Z|1|BA|A|382
4V6Z|1|BA|C|383
4V6Z|1|BA|A|384
4V6Z|1|BA|C|385
4V6Z|1|BA|G|386
4V6Z|1|BA|U|387
4V6Z|1|BA|G|388
4V6Z|1|BA|G|389
4V6Z|1|BA|U|390
4V6Z|1|BA|A|391
4V6Z|1|BA|U|392

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BX

50S ribosomal protein L28