HL_4V70_083

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UUUAUUAAAAA

Length

11 nucleotides

Bulged bases

4V70|1|BA|A|1780, 4V70|1|BA|U|1781, 4V70|1|BA|U|1782, 4V70|1|BA|A|1786

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V70_083 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.4339

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

4V70|1|BA|U|1777
4V70|1|BA|U|1778
4V70|1|BA|U|1779
4V70|1|BA|A|1780
4V70|1|BA|U|1781
4V70|1|BA|U|1782
4V70|1|BA|A|1783
4V70|1|BA|A|1784
4V70|1|BA|A|1785
4V70|1|BA|A|1786
4V70|1|BA|A|1787

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2

Chain BS

50S ribosomal protein L22