HL_4V71_079

3D structure

PDB id

4V71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

4V71|1|BA|A|1634

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V71_079 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.1434

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V71|1|BA|A|1630
4V71|1|BA|G|1631
4V71|1|BA|A|1632
4V71|1|BA|G|1633
4V71|1|BA|A|1634
4V71|1|BA|A|1635
4V71|1|BA|U|1636

Current chains

Chain BA

23S ribosomal RNA

Nearby chains