3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
UGAAAGG
Length
7 nucleotides
Bulged bases
4V72|1|BA|A|781, 4V72|1|BA|G|784
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V72_061 not in the Motif Atlas
Geometric match to HL_6VMY_004
Geometric discrepancy: 0.3035
The information below is about HL_6VMY_004
Detailed Annotation
UNCG variation
Broad Annotation
UNCG variation
Motif group
HL_53890.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
15

Unit IDs

4V72|1|BA|U|779
4V72|1|BA|G|780
4V72|1|BA|A|781
4V72|1|BA|A|782
4V72|1|BA|A|783
4V72|1|BA|G|784
4V72|1|BA|G|785

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BC
50S ribosomal protein L2

Coloring options:


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