3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CGGUGAAAUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V75_021 not in the Motif Atlas
Homologous match to HL_4LFB_015
Geometric discrepancy: 0.1535
The information below is about HL_4LFB_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

4V75|1|AA|C|689
4V75|1|AA|G|690
4V75|1|AA|G|691
4V75|1|AA|U|692
4V75|1|AA|G|693
4V75|1|AA|A|694
4V75|1|AA|A|695
4V75|1|AA|A|696
4V75|1|AA|U|697
4V75|1|AA|G|698

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain A2
5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
Chain A3
Transfer RNA; tRNA
Chain AG
30S ribosomal protein S7
Chain AK
30S ribosomal protein S11
Chain BA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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