HL_4V76_086

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

4V76|1|BA|A|1913, 4V76|1|BA|C|1914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V76_086 not in the Motif Atlas

Homologous match to HL_9DFE_046

Geometric discrepancy: 0.599

The information below is about HL_9DFE_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25847.2

Basepair signature

cWW-F-cSH-tHW-F-F-F

Number of instances in this motif group

3

Unit IDs

4V76|1|BA|G|1910
4V76|1|BA|U|1911
4V76|1|BA|A|1912
4V76|1|BA|A|1913
4V76|1|BA|C|1914
4V76|1|BA|U|1915
4V76|1|BA|A|1916
4V76|1|BA|U|1917
4V76|1|BA|A|1918
4V76|1|BA|A|1919
4V76|1|BA|C|1920

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain AA

Small subunit ribosomal RNA; SSU rRNA