HL_4V7C_138

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

4V7C|1|BA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7C_138 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1564

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V7C|1|BA|A|382
4V7C|1|BA|C|383
4V7C|1|BA|A|384
4V7C|1|BA|C|385
4V7C|1|BA|G|386
4V7C|1|BA|U|387
4V7C|1|BA|G|388
4V7C|1|BA|G|389
4V7C|1|BA|U|390
4V7C|1|BA|A|391
4V7C|1|BA|U|392

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain BZ

50S ribosomal protein L28