HL_4V8E_134
3D structure
- PDB id
- 4V8E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 4V8E|1|CA|C|598
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8E_134 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.0781
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
4V8E|1|CA|U|590
4V8E|1|CA|A|591
4V8E|1|CA|U|592
4V8E|1|CA|U|593
4V8E|1|CA|G|594
4V8E|1|CA|A|595
4V8E|1|CA|A|596
4V8E|1|CA|G|597
4V8E|1|CA|C|598
4V8E|1|CA|A|599
Current chains
- Chain CA
- RNA (2912-MER)
Nearby chains
- Chain C2
- 50S ribosomal protein L21
- Chain C5
- 50S ribosomal protein L32
- Chain CE
- 50S ribosomal protein L3
- Chain CO
- 50S ribosomal protein L15
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