HL_4V91_082

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGUAACUAUGACU

Length

13 nucleotides

Bulged bases

4V91|1|1|A|2256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V91_082 not in the Motif Atlas

Homologous match to HL_8P9A_160

Geometric discrepancy: 0.2787

The information below is about HL_8P9A_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70658.1

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V91|1|1|A|2252
4V91|1|1|G|2253
4V91|1|1|U|2254
4V91|1|1|A|2255
4V91|1|1|A|2256
4V91|1|1|C|2257
4V91|1|1|U|2258
4V91|1|1|A|2259
4V91|1|1|U|2260
4V91|1|1|G|2261
4V91|1|1|A|2262
4V91|1|1|C|2263
4V91|1|1|U|2264

Current chains

Chain 1

25S RRNA

Nearby chains