HL_4WQY_034

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_034 not in the Motif Atlas

Homologous match to HL_5J7L_167

Geometric discrepancy: 0.0695

The information below is about HL_5J7L_167

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4WQY|1|AA|C|1409
4WQY|1|AA|G|1410
4WQY|1|AA|A|1411
4WQY|1|AA|A|1412
4WQY|1|AA|A|1413
4WQY|1|AA|G|1414

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A1

50S ribosomal protein L28

Chain A7

50S ribosomal protein L34