HL_4WQY_153

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUUACCAAAAA

Length

11 nucleotides

Bulged bases

4WQY|1|CA|A|1780, 4WQY|1|CA|C|1781, 4WQY|1|CA|C|1782, 4WQY|1|CA|A|1786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_153 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.0564

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

4WQY|1|CA|U|1777
4WQY|1|CA|U|1778
4WQY|1|CA|U|1779
4WQY|1|CA|A|1780
4WQY|1|CA|C|1781
4WQY|1|CA|C|1782
4WQY|1|CA|A|1783
4WQY|1|CA|A|1784
4WQY|1|CA|A|1785
4WQY|1|CA|A|1786
4WQY|1|CA|A|1787

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C7

50S ribosomal protein L34

Chain CD

50S ribosomal protein L2

Chain CW

50S ribosomal protein L22