3D structure

PDB id
4WWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to CEM-101
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
4WWW|1|QA|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4WWW_017 not in the Motif Atlas
Homologous match to HL_5J7L_017
Geometric discrepancy: 0.0566
The information below is about HL_5J7L_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

4WWW|1|QA|G|786
4WWW|1|QA|A|787
4WWW|1|QA|U|788
4WWW|1|QA|U|789
4WWW|1|QA|A|790
4WWW|1|QA|G|791
4WWW|1|QA|A|792
4WWW|1|QA|U|793
4WWW|1|QA|A|794
4WWW|1|QA|C|795
4WWW|1|QA|C|796

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QK
30S ribosomal protein S11
Chain QU
30S ribosomal protein S21
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2542 s