HL_4WWW_208

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

4WWW|1|QA|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_208 not in the Motif Atlas

Geometric match to HL_8C3A_021

Geometric discrepancy: 0.3095

The information below is about HL_8C3A_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4WWW|1|QA|C|1448
4WWW|1|QA|C|1449
4WWW|1|QA|U|1450
4WWW|1|QA|U|1451
4WWW|1|QA|C|1452
4WWW|1|QA|G|1453
4WWW|1|QA|G|1454
4WWW|1|QA|G|1455

Current chains

Chain QA

16S rRNA

Nearby chains