HL_4X4P_002

3D structure

PDB id

4X4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUUCGAUCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4X4P_002 not in the Motif Atlas

Geometric match to HL_4TUE_219

Geometric discrepancy: 0.3952

The information below is about HL_4TUE_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4X4P|1|D|G|11
4X4P|1|D|G|12
4X4P|1|D|U|13
4X4P|1|D|U|14
4X4P|1|D|C|15
4X4P|1|D|G|16
4X4P|1|D|A|17
4X4P|1|D|U|19
4X4P|1|D|C|20
4X4P|1|D|C|21

Current chains

Chain D

G70A tRNA minihelix ending in CCAC

Nearby chains

Chain C

CCA-adding enzyme