HL_5MMI_004
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAAUCCAUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MMI_004 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.2277
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5MMI|1|A|U|142
5MMI|1|A|G|143
5MMI|1|A|A|144
5MMI|1|A|A|145
5MMI|1|A|U|146
5MMI|1|A|C|147
5MMI|1|A|C|148
5MMI|1|A|A|149
5MMI|1|A|U|150
5MMI|1|A|G|151
5MMI|1|A|G|152
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Y
- plastid ribosomal protein bL28c
Coloring options: