HL_5MMI_030
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MMI_030 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.1081
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
5MMI|1|A|C|1120
5MMI|1|A|G|1121
5MMI|1|A|U|1122
5MMI|1|A|A|1123
5MMI|1|A|A|1124
5MMI|1|A|U|1125
5MMI|1|A|A|1126
5MMI|1|A|G|1127
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L36, chloroplastic
- Chain G
- plastid ribosomal protein uL6c
- Chain J
- 50S ribosomal protein L11, chloroplastic
Coloring options: