HL_5MMI_068
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 5MMI|1|A|G|2769, 5MMI|1|A|C|2773
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MMI_068 not in the Motif Atlas
- Homologous match to HL_7RQB_066
- Geometric discrepancy: 0.1298
- The information below is about HL_7RQB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.7
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 8
Unit IDs
5MMI|1|A|C|2763
5MMI|1|A|U|2764
5MMI|1|A|G|2765
5MMI|1|A|A|2766
5MMI|1|A|A|2767
5MMI|1|A|A|2768
5MMI|1|A|G|2769
5MMI|1|A|C|2770
5MMI|1|A|A|2771
5MMI|1|A|U|2772
5MMI|1|A|C|2773
5MMI|1|A|U|2774
5MMI|1|A|A|2775
5MMI|1|A|A|2776
5MMI|1|A|G|2777
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L36, chloroplastic
- Chain G
- plastid ribosomal protein uL6c
- Chain K
- 50S ribosomal protein L13, chloroplastic
Coloring options: