HL_5MMI_076
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCACGUGGAAU
- Length
- 11 nucleotides
- Bulged bases
- 5MMI|1|A|G|398
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MMI_076 not in the Motif Atlas
- Homologous match to HL_5J7L_145
- Geometric discrepancy: 0.1787
- The information below is about HL_5J7L_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5MMI|1|A|G|394
5MMI|1|A|C|395
5MMI|1|A|A|396
5MMI|1|A|C|397
5MMI|1|A|G|398
5MMI|1|A|U|399
5MMI|1|A|G|400
5MMI|1|A|G|401
5MMI|1|A|A|402
5MMI|1|A|A|403
5MMI|1|A|U|404
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Y
- plastid ribosomal protein bL28c
- Chain z
- E-site tRNA
Coloring options: