HL_5NJT_036
3D structure
- PDB id
- 5NJT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UGAAUUCAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NJT_036 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.2823
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5NJT|1|U|U|159
5NJT|1|U|G|160
5NJT|1|U|A|161
5NJT|1|U|A|162
5NJT|1|U|U|163
5NJT|1|U|U|164
5NJT|1|U|C|165
5NJT|1|U|A|166
5NJT|1|U|U|167
5NJT|1|U|A|168
5NJT|1|U|G|169
Current chains
- Chain U
- 23S ribosomal RNA
Nearby chains
- Chain u
- 50S ribosomal protein L28
Coloring options: