HL_5O61_091
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CGGUGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5O61_091 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.0956
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
5O61|1|BA|C|669
5O61|1|BA|G|670
5O61|1|BA|G|671
5O61|1|BA|U|672
5O61|1|BA|G|673
5O61|1|BA|G|674
5O61|1|BA|A|675
5O61|1|BA|A|676
5O61|1|BA|U|677
5O61|1|BA|G|678
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 30S ribosomal protein S7
- Chain BK
- 30S ribosomal protein S11
- Chain BX
- mRNA fragment
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