HL_5O61_113
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GCCCGUGGAAU
- Length
- 11 nucleotides
- Bulged bases
- 5O61|1|A|G|474, 5O61|1|A|G|477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5O61_113 not in the Motif Atlas
- Homologous match to HL_5J7L_145
- Geometric discrepancy: 0.2528
- The information below is about HL_5J7L_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5O61|1|A|G|470
5O61|1|A|C|471
5O61|1|A|C|472
5O61|1|A|C|473
5O61|1|A|G|474
5O61|1|A|U|475
5O61|1|A|G|476
5O61|1|A|G|477
5O61|1|A|A|478
5O61|1|A|A|479
5O61|1|A|U|480
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L15
- Chain Y
- LSU ribosomal protein L28P
Coloring options: