HL_5OT7_058
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 5OT7|1|4|U|747, 5OT7|1|4|A|751, 5OT7|1|4|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_058 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.2206
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
5OT7|1|4|G|744
5OT7|1|4|G|745
5OT7|1|4|A|746
5OT7|1|4|U|747
5OT7|1|4|G|748
5OT7|1|4|C|749
5OT7|1|4|A|750
5OT7|1|4|A|751
5OT7|1|4|A|752
5OT7|1|4|C|753
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L34
- Chain h
- 50S ribosomal protein L3
- Chain x
- 50S ribosomal protein L22
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