HL_5U4I_012
3D structure
- PDB id
- 5U4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACACGUGGUAU
- Length
- 11 nucleotides
- Bulged bases
- 5U4I|1|A|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5U4I_012 not in the Motif Atlas
- Homologous match to HL_5J7L_145
- Geometric discrepancy: 0.2001
- The information below is about HL_5J7L_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5U4I|1|A|A|382
5U4I|1|A|C|383
5U4I|1|A|A|384
5U4I|1|A|C|385
5U4I|1|A|G|386
5U4I|1|A|U|387
5U4I|1|A|G|388
5U4I|1|A|G|389
5U4I|1|A|U|390
5U4I|1|A|A|391
5U4I|1|A|U|392
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain Y
- 50S ribosomal protein L28
- Chain y
- Transfer RNA; tRNA
Coloring options: