HL_5UYN_005
3D structure
- PDB id
- 5UYN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UGAAUCCAUAG
- Length
- 11 nucleotides
- Bulged bases
- 5UYN|1|01|U|162
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UYN_005 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.2435
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5UYN|1|01|U|158
5UYN|1|01|G|159
5UYN|1|01|A|160
5UYN|1|01|A|161
5UYN|1|01|U|162
5UYN|1|01|C|163
5UYN|1|01|C|164
5UYN|1|01|A|165
5UYN|1|01|U|166
5UYN|1|01|A|167
5UYN|1|01|G|168
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 26
- 50S ribosomal protein L28
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