HL_5ZLU_020
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 5ZLU|1|G|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ZLU_020 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1613
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
5ZLU|1|G|G|786
5ZLU|1|G|A|787
5ZLU|1|G|U|788
5ZLU|1|G|U|789
5ZLU|1|G|A|790
5ZLU|1|G|G|791
5ZLU|1|G|A|792
5ZLU|1|G|U|793
5ZLU|1|G|A|794
5ZLU|1|G|C|795
5ZLU|1|G|C|796
Current chains
- Chain G
- 16S ribosomal RNA
Nearby chains
- Chain DD
- Transfer RNA; tRNA
- Chain P
- 30S ribosomal protein S11
- Chain V
- Large subunit ribosomal RNA; LSU rRNA
- Chain W
- RNA (25-mer)
Coloring options: