HL_5ZLU_045

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUGGGAAGC

Length

10 nucleotides

Bulged bases

5ZLU|1|V|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_045 not in the Motif Atlas

Geometric match to HL_8CRE_223

Geometric discrepancy: 0.3113

The information below is about HL_8CRE_223

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67079.1

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

5ZLU|1|V|G|304
5ZLU|1|V|U|305
5ZLU|1|V|U|306
5ZLU|1|V|G|307
5ZLU|1|V|G|308
5ZLU|1|V|G|309
5ZLU|1|V|A|310
5ZLU|1|V|A|311
5ZLU|1|V|G|312
5ZLU|1|V|C|313

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain r

50S ribosomal protein L24