HL_5ZLU_081
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGUAACUAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 5ZLU|1|V|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ZLU_081 not in the Motif Atlas
- Geometric match to HL_8P9A_160
- Geometric discrepancy: 0.2946
- The information below is about HL_8P9A_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70658.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5ZLU|1|V|C|1909
5ZLU|1|V|G|1910
5ZLU|1|V|U|1911
5ZLU|1|V|A|1912
5ZLU|1|V|A|1913
5ZLU|1|V|C|1914
5ZLU|1|V|U|1915
5ZLU|1|V|A|1916
5ZLU|1|V|U|1917
5ZLU|1|V|A|1918
5ZLU|1|V|A|1919
5ZLU|1|V|C|1920
5ZLU|1|V|G|1921
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain DD
- Transfer RNA; tRNA
- Chain G
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: