HL_5ZLU_099

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5ZLU|1|V|G|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_099 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.5478

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

5ZLU|1|V|C|2745
5ZLU|1|V|U|2746
5ZLU|1|V|G|2747
5ZLU|1|V|A|2748
5ZLU|1|V|A|2749
5ZLU|1|V|A|2750
5ZLU|1|V|G|2751
5ZLU|1|V|C|2752
5ZLU|1|V|A|2753
5ZLU|1|V|U|2754
5ZLU|1|V|C|2755
5ZLU|1|V|U|2756
5ZLU|1|V|A|2757
5ZLU|1|V|A|2758
5ZLU|1|V|G|2759

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain BB

50S ribosomal protein L36

Chain d

50S ribosomal protein L6