HL_6BOH_049
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 6BOH|1|B|C|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOH_049 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.1101
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
6BOH|1|B|U|566
6BOH|1|B|A|567
6BOH|1|B|U|568
6BOH|1|B|U|569
6BOH|1|B|G|570
6BOH|1|B|A|571
6BOH|1|B|A|572
6BOH|1|B|G|573
6BOH|1|B|C|574
6BOH|1|B|A|575
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain CA
- 50S ribosomal protein L32
- Chain F
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L15
- Chain S
- 50S ribosomal protein L21
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