HL_6BY1_091

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6BY1|1|CA|G|386, 6BY1|1|CA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_091 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1907

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6BY1|1|CA|A|382
6BY1|1|CA|C|383
6BY1|1|CA|A|384
6BY1|1|CA|C|385
6BY1|1|CA|G|386
6BY1|1|CA|U|387
6BY1|1|CA|G|388
6BY1|1|CA|G|389
6BY1|1|CA|U|390
6BY1|1|CA|A|391
6BY1|1|CA|U|392

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain AY

Transfer RNA; tRNA

Chain CX

50S ribosomal protein L28