HL_6ENF_011

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6ENF|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENF_011 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1978

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6ENF|1|A|A|382
6ENF|1|A|C|383
6ENF|1|A|A|384
6ENF|1|A|C|385
6ENF|1|A|G|386
6ENF|1|A|U|387
6ENF|1|A|G|388
6ENF|1|A|G|389
6ENF|1|A|U|390
6ENF|1|A|A|391
6ENF|1|A|U|392

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28